Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1714: 10082 - K01372 BLMH, pepC bleomycin hydrolase, at 15983 to 18222 10082 mRNA_1715: 10083 - K18328 DBR1 lariat debranching enzyme, at 18768 to 21096 10083 mRNA_1716: 10084 - K14799 TSR1 pre-rRNA-processing protein TSR1, at 21403 to 24344 10084 mRNA_1717: 10085 - HMMPfam-Per1-like-PF04080, at 24723 to 26291 10085 mRNA_1718: 10086 - HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072, at 26598 to 27052 10086
Group Condition mRNA_1714 mRNA_1715 mRNA_1716 mRNA_1717 mRNA_1718
10082
10083
10084
10085
10086
growth on ricinoleic acid YNB Ricinoleic Acid 0.4     -2.0  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3     -1.5  
growth on ricinoleic acid YNB Glucose 0.3     -1.3  
auxotrophy YNB Glucose 0.2     -1.1  
growth on oleic acid YNB Glucose 0.1     -0.9  
auxotrophy YNB Glucose 75mM Methionine 0.1     -0.8  
auxotrophy YNB Glucose 75mM Arginine 0.2     -0.8  
ypd buoyancy 40 hrs High Buoyancy -0.3     -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.3     -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.2     -0.2  
growth on ypd YPD 0.0     -0.3  
auxotrophy Dropout Complete 0.3     -0.5  
ypd buoyancy 40 hrs Low Buoyancy -0.0     0.0  
growth on oleic acid YNB Oleic Acid 0.1     -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.1     0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0     0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2     0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0     0.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.0     0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.3     0.4  
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