Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1709: 10077 - K16302 CNNM metal transporter CNNM, at 5028 to 7438 10077 mRNA_1710: 10078 - Hypothetical Protein, at 7999 to 8750 10078 mRNA_1711: 10079 - K01887 RARS, argS arginyl-tRNA synthetase, at 9070 to 11520 10079 mRNA_1712: 10080 - KOG2131 Uncharacterized conserved protein, contains JmjC domain, at 12015 to 13653 10080 mRNA_1713: 10081 - KOG0022 Alcohol dehydrogenase, class III, at 13985 to 15656 10081
Group Condition mRNA_1709 mRNA_1710 mRNA_1711 mRNA_1712 mRNA_1713
10077
10078
10079
10080
10081
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.9   -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.5   -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.4   0.0 0.0
growth on ypd YPD 0.5 -0.6   -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.0   -0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2   -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.3   -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4   0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.1   -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.2   0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1   0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.3   0.2 0.1
growth on oleic acid YNB Oleic Acid 0.1 0.5   0.0 0.1
growth on oleic acid YNB Glucose 0.0 0.5   0.0 0.2
auxotrophy Dropout Complete -0.1 0.6   -0.0 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 0.7   -0.2 0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 1.2   -0.5 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.4   0.1 0.1
growth on ricinoleic acid YNB Glucose -0.0 0.6   0.4 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.4   0.0 0.2
auxotrophy YNB Glucose 0.0 1.0   0.0 0.0
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