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Cofit
Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1700: 10068 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 927160 to 928283
10068
mRNA_1701: 10069 - K03522 fixB, etfA electron transfer flavoprotein alpha subunit, at 928577 to 930398
10069
mRNA_1702: 10070 - Hypothetical Protein, at 930827 to 931156
10070
mRNA_1703: 10071 - SUPERFAMILY--SSF49764, at 933150 to 935625
10071
mRNA_1704: 10072 - K17777 TIM9 mitochondrial import inner membrane translocase subunit TIM9, at 936376 to 936792
10072
Group
Condition
mRNA_1700
mRNA_1701
mRNA_1702
mRNA_1703
mRNA_1704
10068
10069
10070
10071
10072
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-2.8
-0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-1.7
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.3
-1.9
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-1.9
-0.0
-0.1
auxotrophy
YNB Glucose
-0.2
-0.9
-0.4
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-1.3
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-1.0
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.7
-0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.0
-0.8
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.6
-0.5
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.5
-0.4
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-1.0
0.1
0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.5
-0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.7
0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.9
0.1
0.2
growth on oleic acid
YNB Glucose
-0.0
-0.6
0.4
-0.2
auxotrophy
Dropout Complete
-0.1
0.6
-0.9
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-2.0
0.9
0.3
growth on ypd
YPD
-0.1
-0.4
0.7
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.1
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.0
0.1
0.1
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