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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1680: 10048 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 876384 to 878826
10048
mRNA_1681: 10049 - K03126 TAF12 transcription initiation factor TFIID subunit 12, at 879318 to 879933
10049
mRNA_1682: 10050 - Hypothetical Protein, at 881676 to 882111
10050
mRNA_1683: 10051 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 882700 to 883622
10051
mRNA_1684: 10052 - Hypothetical Protein, at 883850 to 884776
10052
Group
Condition
mRNA_1680
mRNA_1681
mRNA_1682
mRNA_1683
mRNA_1684
10048
10049
10050
10051
10052
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.0
-1.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
-1.1
growth on ypd
YPD
0.2
-0.1
-0.8
growth on ricinoleic acid
YNB Glucose
-0.6
0.1
0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.2
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
-0.2
0.9
growth on oleic acid
YNB Glucose
0.0
0.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.1
0.2
auxotrophy
YNB Glucose
0.1
0.0
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.1
0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.5
1.3
auxotrophy
Dropout Complete
0.2
0.1
1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.7
1.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.1
1.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.0
2.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.6
1.9
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