Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1666: 10034 - HMMPfam-Nucleolar protein 12 (25kDa)-PF09805, at 840920 to 841915 10034 mRNA_1667: 10035 - K11527 K11527 two-component system, sensor histidine kinase and response regulator, at 842295 to 847609 10035 mRNA_1668: 10036 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 848567 to 849208 10036 mRNA_1669: 10037 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 849506 to 850957 10037 mRNA_1670: 10038 - K15918 GLYK D-glycerate 3-kinase, at 851334 to 852644 10038
Group Condition mRNA_1666 mRNA_1667 mRNA_1668 mRNA_1669 mRNA_1670
10034
10035
10036
10037
10038
auxotrophy Dropout Complete   -0.2 -0.6 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -1.2 -0.1 0.6
growth on oleic acid YNB Oleic Acid   -0.2 0.2 -0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation   0.1 -0.1 0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine   -0.2 -0.3 0.0 -0.0
growth on oleic acid YNB Glucose   0.2 0.0 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 -0.3 0.1 0.0
facs on lipid accumulation Sorted No BODIPY Gate   0.2 -0.8 0.2 0.3
ypd buoyancy 40 hrs Low Buoyancy   0.0 0.1 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine   -0.2 -0.0 0.2 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.1 -0.1 -0.3 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 0.0 0.5 -0.4
growth on ricinoleic acid YNB Glucose   0.1 -0.2 0.4 0.0
auxotrophy YNB Glucose   -0.1 0.3 0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.3 0.3 0.1 0.3
ypd buoyancy 40 hrs Median Buoyancy   -0.0 0.4 0.1 0.1
growth on ypd YPD   -0.1 0.9 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 0.4 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 0.3 0.3 0.4
ypd buoyancy 40 hrs High Buoyancy   0.1 0.2 0.3 0.4
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 0.6 0.7 -0.1
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