Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1665: 10033 - K03358 APC11 anaphase-promoting complex subunit 11, at 840073 to 840626 10033 mRNA_1666: 10034 - HMMPfam-Nucleolar protein 12 (25kDa)-PF09805, at 840920 to 841915 10034 mRNA_1667: 10035 - K11527 K11527 two-component system, sensor histidine kinase and response regulator, at 842295 to 847609 10035 mRNA_1668: 10036 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 848567 to 849208 10036 mRNA_1669: 10037 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 849506 to 850957 10037
Group Condition mRNA_1665 mRNA_1666 mRNA_1667 mRNA_1668 mRNA_1669
10033
10034
10035
10036
10037
facs on lipid accumulation Sorted Low BODIPY Gate -0.8   0.2 -1.2 -0.1
auxotrophy Dropout Complete -0.1   -0.2 -0.6 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.6   0.0 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.2 -0.8 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0   0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.2 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3   -0.2 -0.3 0.0
growth on oleic acid YNB Glucose -0.1   0.2 0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.3   0.1 -0.2 0.4
growth on oleic acid YNB Oleic Acid 0.2   -0.2 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7   -0.2 -0.3 0.1
auxotrophy YNB Glucose 0.3   -0.1 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   0.1 0.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6   -0.3 0.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.7   0.1 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2   -0.0 0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4   -0.1 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.6   0.2 0.6 0.7
ypd buoyancy 40 hrs High Buoyancy 0.5   0.1 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5   0.1 0.4 0.1
growth on ypd YPD 0.8   -0.1 0.9 -0.1
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