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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1663: 10031 - ProSiteProfiles-Gram-positive cocci surface proteins LPxTG motif profile.-PS50847, at 838138 to 838939
10031
mRNA_1664: 10032 - Hypothetical Protein, at 839367 to 840051
10032
mRNA_1665: 10033 - K03358 APC11 anaphase-promoting complex subunit 11, at 840073 to 840626
10033
mRNA_1666: 10034 - HMMPfam-Nucleolar protein 12 (25kDa)-PF09805, at 840920 to 841915
10034
mRNA_1667: 10035 - K11527 K11527 two-component system, sensor histidine kinase and response regulator, at 842295 to 847609
10035
Group
Condition
mRNA_1663
mRNA_1664
mRNA_1665
mRNA_1666
mRNA_1667
10031
10032
10033
10034
10035
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.8
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.6
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.6
0.2
auxotrophy
Dropout Complete
-0.0
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.6
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.0
0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.5
0.5
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.1
0.2
auxotrophy
YNB Glucose
-0.0
0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.7
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.7
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.5
0.1
growth on ypd
YPD
0.1
0.8
-0.1
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