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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1661: 10029 - K13979 yahK uncharacterized zinc-type alcohol dehydrogenase-like protein, at 834385 to 835559
10029
mRNA_1662: 10030 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 836200 to 837347
10030
mRNA_1663: 10031 - ProSiteProfiles-Gram-positive cocci surface proteins LPxTG motif profile.-PS50847, at 838138 to 838939
10031
mRNA_1664: 10032 - Hypothetical Protein, at 839367 to 840051
10032
mRNA_1665: 10033 - K03358 APC11 anaphase-promoting complex subunit 11, at 840073 to 840626
10033
Group
Condition
mRNA_1661
mRNA_1662
mRNA_1663
mRNA_1664
mRNA_1665
10029
10030
10031
10032
10033
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.1
-0.3
-0.8
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
-0.4
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.3
-0.3
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.3
-0.5
0.5
auxotrophy
Dropout Complete
-0.0
-0.3
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.0
-0.0
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.4
-0.1
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.4
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
0.0
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.7
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
0.0
-0.2
0.7
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
-0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.0
-0.2
0.3
growth on oleic acid
YNB Oleic Acid
-0.2
0.0
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.2
-0.3
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.3
-0.1
0.1
growth on ypd
YPD
-0.6
0.1
0.1
0.8
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.3
0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-0.2
-0.4
0.7
auxotrophy
YNB Glucose
0.2
0.2
-0.0
0.3
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