Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1659: 10027 - K08741 MSH5 DNA mismatch repair protein MSH5, at 828859 to 833266 10027 mRNA_1660: 10028 - Hypothetical Protein, at 833434 to 834294 10028 mRNA_1661: 10029 - K13979 yahK uncharacterized zinc-type alcohol dehydrogenase-like protein, at 834385 to 835559 10029 mRNA_1662: 10030 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 836200 to 837347 10030 mRNA_1663: 10031 - ProSiteProfiles-Gram-positive cocci surface proteins LPxTG motif profile.-PS50847, at 838138 to 838939 10031
Group Condition mRNA_1659 mRNA_1660 mRNA_1661 mRNA_1662 mRNA_1663
10027
10028
10029
10030
10031
ypd buoyancy 40 hrs Low Buoyancy 0.1 -1.9 -0.0 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.0 -0.8 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.3 -0.4 0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.6 -0.2 -0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.6 -0.4 0.7  
auxotrophy Dropout Complete 0.1 -0.9 -0.0 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.3 0.5 -0.2  
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4 -0.0 -0.0  
growth on oleic acid YNB Glucose 0.1 -0.5 -0.1 -0.0  
growth on oleic acid YNB Oleic Acid -0.0 -0.2 -0.2 0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.4 0.2 -0.1  
growth on ypd YPD 0.0 0.2 -0.6 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 -0.2 -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.6 -0.5 0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 0.1 0.3  
ypd buoyancy 40 hrs High Buoyancy 0.1 0.8 -0.4 -0.3  
auxotrophy YNB Glucose -0.0 -0.3 0.2 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.3 -0.2 0.3  
growth on ricinoleic acid YNB Glucose 0.1 0.2 0.0 -0.0  
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 0.2 0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 1.3 0.2 -0.2  
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