Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1655: 10023 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 819421 to 820962 10023 mRNA_1656: 10024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 821084 to 822700 10024 mRNA_1657: 10025 - K08286 E2.7.11.- protein-serine/threonine kinase, at 823190 to 825684 10025 mRNA_1658: 10026 - K02893 RP-L23Ae, RPL23A large subunit ribosomal protein L23Ae, at 826831 to 828048 10026 mRNA_1659: 10027 - K08741 MSH5 DNA mismatch repair protein MSH5, at 828859 to 833266 10027
Group Condition mRNA_1655 mRNA_1656 mRNA_1657 mRNA_1658 mRNA_1659
10023
10024
10025
10026
10027
growth on ricinoleic acid YNB Ricinoleic Acid -0.4   -4.8   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   -4.3   0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0   -3.5   0.1
growth on oleic acid YNB Oleic Acid 0.1   -1.9   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.0   -1.3   -0.1
growth on ricinoleic acid YNB Glucose 0.2   -1.7   0.1
auxotrophy YNB Glucose 75mM Methionine -0.2   -0.7   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   -1.1   -0.0
auxotrophy YNB Glucose 0.1   -1.0   -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3   -1.0   0.1
auxotrophy YNB Glucose 75mM Arginine 0.3   -0.7   0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0   -0.1   0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.0   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0   0.1   0.1
growth on oleic acid YNB Glucose 0.5   -0.3   0.1
auxotrophy Dropout Complete 0.2   -0.1   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0   0.5   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.5   0.0
growth on ypd YPD 0.5   0.2   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   1.0   0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3   2.7   -0.2
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