Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1647: 10015 - K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e, at 800171 to 801820 10015 mRNA_1648: 10016 - K11436 PRMT3 type I protein arginine methyltransferase, at 802282 to 804374 10016 mRNA_1649: 10017 - KOG2495 NADH-dehydrogenase (ubiquinone), at 804506 to 806689 10017 mRNA_1650: 10018 - KOG0254 Predicted transporter (major facilitator superfamily), at 807576 to 811155 10018 mRNA_1651: 10019 - SUPERFAMILY--SSF69047, at 811349 to 811874 10019
Group Condition mRNA_1647 mRNA_1648 mRNA_1649 mRNA_1650 mRNA_1651
10015
10016
10017
10018
10019
growth on ypd YPD     -0.3 -0.4 -0.0
auxotrophy Dropout Complete     0.1 -0.8 0.0
auxotrophy YNB Glucose     0.1 -0.6 0.0
auxotrophy YNB Glucose 75mM Methionine     0.3 -0.7 0.1
ypd buoyancy 40 hrs No Buoyancy Separation     -0.7 0.0 0.4
growth on ricinoleic acid YNB Ricinoleic Acid     0.6 -0.7 0.0
ypd buoyancy 40 hrs High Buoyancy     -0.3 0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy     -0.2 0.1 0.1
growth on ricinoleic acid YNB Glucose     0.3 -0.7 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid     0.5 -1.0 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.5 -0.4 0.0
growth on oleic acid YNB Oleic Acid     0.4 -0.5 0.2
auxotrophy YNB Glucose 75mM Arginine     0.3 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.5 -0.2 -0.1
growth on oleic acid YNB Glucose     0.4 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate     0.3 -0.2 0.3
ypd buoyancy 40 hrs Median Buoyancy     -0.0 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.7 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate     0.4 0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.5 -0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate     0.5 0.4 0.1
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