Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1643: 10011 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 790426 to 792624 10011 mRNA_1644: 10012 - K00253 IVD, ivd isovaleryl-CoA dehydrogenase, at 792797 to 794915 10012 mRNA_1645: 10013 - Hypothetical Protein, at 795092 to 795670 10013 mRNA_1646: 10014 - KOG2182 Hydrolytic enzymes of the alpha/beta hydrolase fold, at 796005 to 798167 10014 mRNA_1647: 10015 - K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e, at 800171 to 801820 10015
Group Condition mRNA_1643 mRNA_1644 mRNA_1645 mRNA_1646 mRNA_1647
10011
10012
10013
10014
10015
growth on ypd YPD -0.4 -0.6   -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.6   -0.6  
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.1   -0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.2   0.3  
auxotrophy Dropout Complete 0.4 -0.6   -0.3  
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.5   -0.4  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.3   -0.3  
growth on oleic acid YNB Oleic Acid 0.4 -0.2   -0.5  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0   -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.3   -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3   0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1   -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0   -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.0   0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0   -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1   -0.1  
growth on oleic acid YNB Glucose 0.2 -0.0   -0.2  
auxotrophy YNB Glucose 0.7 -0.4   -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.1   -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.7 0.1   0.1  
growth on ricinoleic acid YNB Glucose 0.5 0.4   0.1  
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