Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1632: 10000 - K00036 G6PD, zwf glucose-6-phosphate 1-dehydrogenase, at 760062 to 761705 10000 mRNA_1633: 10001 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 762446 to 764135 10001 mRNA_1634: 10002 - HMMPfam-alpha/beta hydrolase fold-PF07859,ProSitePatterns-Lipolytic enzymes "G-D-X-G" family, putative serine active site.-PS01174,SUPERFAMILY--SSF53474, at 764315 to 766210 10002 mRNA_1635: 10003 - K18748 SSD1 protein SSD1, at 767214 to 771755 10003 mRNA_1636: 10004 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 772019 to 773712 10004
Group Condition mRNA_1632 mRNA_1633 mRNA_1634 mRNA_1635 mRNA_1636
10000
10001
10002
10003
10004
growth on oleic acid YNB Oleic Acid   -0.8 -0.1 -0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 -0.4 -0.7 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid   -0.5 -0.1 -0.7 -0.0
auxotrophy YNB Glucose 75mM Arginine   -0.7 -0.0 -0.4 -0.3
auxotrophy Dropout Complete   -0.4 0.1 -0.7 -0.3
growth on oleic acid YNB Glucose   -0.7 -0.0 -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.4 -0.2 -0.5 -0.2
growth on ypd YPD   -0.7 -0.4 -0.0 0.1
growth on ricinoleic acid YNB Glucose   -0.6 0.1 -0.4 -0.1
auxotrophy YNB Glucose   -0.2 0.1 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 -0.1 -0.6 0.0
facs on lipid accumulation Sorted Low BODIPY Gate   0.6 0.3 -1.3 0.1
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.4 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy   0.0 -0.5 0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 0.2 -0.5 0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.5 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   1.5 -1.6 -0.1 0.4
facs on lipid accumulation Sorted High BODIPY Gate   -0.6 0.5 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.5 0.0 -0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy   0.5 -0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.7 0.2 -0.3 0.1
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