Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1631: 9999 - BLAST Tyrosine-protein phosphatase non-receptor type 23 [St..., at 757960 to 758498 9999 mRNA_1632: 10000 - K00036 G6PD, zwf glucose-6-phosphate 1-dehydrogenase, at 760062 to 761705 10000 mRNA_1633: 10001 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 762446 to 764135 10001 mRNA_1634: 10002 - HMMPfam-alpha/beta hydrolase fold-PF07859,ProSitePatterns-Lipolytic enzymes "G-D-X-G" family, putative serine active site.-PS01174,SUPERFAMILY--SSF53474, at 764315 to 766210 10002 mRNA_1635: 10003 - K18748 SSD1 protein SSD1, at 767214 to 771755 10003
Group Condition mRNA_1631 mRNA_1632 mRNA_1633 mRNA_1634 mRNA_1635
9999
10000
10001
10002
10003
growth on ricinoleic acid YNB Ricinoleic Acid -0.6   -0.5 -0.1 -0.7
growth on oleic acid YNB Oleic Acid -0.4   -0.8 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3   -0.7 -0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.3   -0.4 -0.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   -0.3 -0.4 -0.7
growth on ricinoleic acid YNB Glucose -0.4   -0.6 0.1 -0.4
auxotrophy Dropout Complete 0.1   -0.4 0.1 -0.7
growth on oleic acid YNB Glucose 0.1   -0.7 -0.0 -0.4
growth on ypd YPD 0.2   -0.7 -0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4   0.6 0.3 -1.3
auxotrophy YNB Glucose -0.1   -0.2 0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0   0.0 -0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   1.5 -1.6 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2   0.0 -0.5 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2   -0.6 0.5 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3   -0.1 0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2   0.2 -0.4 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   0.3 0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.5 0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.5   0.5 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6   0.7 0.2 -0.3
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