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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1630: 9998 - SUPERFAMILY--SSF81383, at 756759 to 757602
9998
mRNA_1631: 9999 - BLAST Tyrosine-protein phosphatase non-receptor type 23 [St..., at 757960 to 758498
9999
mRNA_1632: 10000 - K00036 G6PD, zwf glucose-6-phosphate 1-dehydrogenase, at 760062 to 761705
10000
mRNA_1633: 10001 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 762446 to 764135
10001
mRNA_1634: 10002 - HMMPfam-alpha/beta hydrolase fold-PF07859,ProSitePatterns-Lipolytic enzymes "G-D-X-G" family, putative serine active site.-PS01174,SUPERFAMILY--SSF53474, at 764315 to 766210
10002
Group
Condition
mRNA_1630
mRNA_1631
mRNA_1632
mRNA_1633
mRNA_1634
9998
9999
10000
10001
10002
growth on oleic acid
YNB Oleic Acid
0.3
-0.4
-0.8
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.6
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.3
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.3
-0.7
-0.0
growth on ricinoleic acid
YNB Glucose
0.1
-0.4
-0.6
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.3
-0.1
0.5
growth on ypd
YPD
0.5
0.2
-0.7
-0.4
auxotrophy
Dropout Complete
-0.0
0.1
-0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.1
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.2
-0.6
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.0
0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
0.2
0.0
-0.5
growth on oleic acid
YNB Glucose
0.7
0.1
-0.7
-0.0
auxotrophy
YNB Glucose
0.4
-0.1
-0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.4
0.6
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
0.1
1.5
-1.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.1
0.5
0.0
ypd buoyancy
40 hrs Low Buoyancy
1.0
0.2
0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
0.3
0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.6
0.7
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.8
0.5
0.5
-0.1
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