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Gene info for mRNA_1605 in
Rhodosporidium toruloides IFO0880
mRNA_1605 9973:
Hypothetical Protein
Type 1: Protein-coding gene
Located on scaffold scaffold_11, + strand, nucleotides 703,733 to 704,608
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_1600: 9968 - K12178 COPS4, CSN4 COP9 signalosome complex subunit 4, at 692318 to 693945
9968
mRNA_1601: 9969 - HMMPfam-Protein of unknown function (DUF1682)-PF07946,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 694292 to 695992
9969
mRNA_1602: 9970 - HMMPfam-Protein of unknown function (DUF2013)-PF09431, at 696270 to 698823
9970
mRNA_1603: 9971 - KOG2948 Predicted metal-binding protein, at 699316 to 700594
9971
mRNA_1604: 9972 - K02209 MCM5, CDC46 DNA replication licensing factor MCM5, at 700738 to 703638
9972
mRNA_1605: 9973 - Hypothetical Protein, at 703733 to 704608
9973
mRNA_1606: 9974 - Hypothetical Protein, at 705021 to 705665
9974
mRNA_1607: 9975 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 706172 to 709618
9975
mRNA_1608: 9976 - K19704 PTC1 protein phosphatase PTC1, at 709938 to 711637
9976
mRNA_1609: 9977 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 712765 to 713275
9977
mRNA_1610: 9978 - HMMPfam-CrcB-like protein-PF02537, at 714472 to 715757
9978
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_1600
9968
K12178 COPS4, CSN4 COP9 signalosome complex subunit 4
-
cofit
mRNA_1601
9969
HMMPfam-Protein of unknown function (DUF1682)-PF07946,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
-
347
cofit
mRNA_1602
9970
HMMPfam-Protein of unknown function (DUF2013)-PF09431
-
278
insig.
mRNA_1603
9971
KOG2948 Predicted metal-binding protein
+
493
no data
mRNA_1604
9972
K02209 MCM5, CDC46 DNA replication licensing factor MCM5
-
144
no data
mRNA_1605
9973
Hypothetical Protein
+
95
insig.
mRNA_1606
9974
Hypothetical Protein
+
413
cofit
mRNA_1607
9975
HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
+
507
insig.
mRNA_1608
9976
K19704 PTC1 protein phosphatase PTC1
-
320
cofit
mRNA_1609
9977
HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240
-
1128
cofit
mRNA_1610
9978
HMMPfam-CrcB-like protein-PF02537
-
1197
cofit