Gene info for mRNA_1162 in Rhodosporidium toruloides IFO0880

mRNA_1162 9530: SUPERFAMILY--SSF52047

Type 1: Protein-coding gene
Located on scaffold scaffold_10, - strand, nucleotides 547,799 to 548,923

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_1157: 9525 - K14818 SQT1 ribosome assembly protein SQT1, at 531850 to 533484 9525 mRNA_1158: 9526 - Hypothetical Protein, at 533999 to 537881 9526 mRNA_1159: 9527 - HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540, at 538557 to 540883 9527 mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540916 to 543538 9528 mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543983 to 547395 9529 mRNA_1162: 9530 - SUPERFAMILY--SSF52047, at 547799 to 548923 9530 mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553391 to 554372 9533 mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554788 to 557060 9534 mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557587 to 560660 9535
Locus Name Description Strand Distance (nt) Phenotype
mRNA_1157 9525 K14818 SQT1 ribosome assembly protein SQT1 + no data
mRNA_1158 9526 Hypothetical Protein + 515 insig.
mRNA_1159 9527 HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540 + 676 cofit
mRNA_1160 9528 KOG4159 Predicted E3 ubiquitin ligase - 33 cofit
mRNA_1161 9529 K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1 - 445 no data
mRNA_1162 9530 SUPERFAMILY--SSF52047 - 404 cofit
mRNA_1163 9531 KOG1378 Purple acid phosphatase + 443 cofit
mRNA_1164 9532 Hypothetical Protein + 837 cofit
mRNA_1165 9533 HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920 + 431 cofit
mRNA_1166 9534 KOG2533 Permease of the major facilitator superfamily - 416 cofit
mRNA_1167 9535 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - 527 cofit