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Gene info for mRNA_1141 in
Rhodosporidium toruloides IFO0880
mRNA_1141 9509:
ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
Type 1: Protein-coding gene
Located on scaffold scaffold_10, + strand, nucleotides 502,606 to 503,454
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_1136: 9504 - Hypothetical Protein, at 492324 to 493013
9504
mRNA_1137: 9505 - KOG2363 Protein subunit of nuclear ribonuclease P (RNase P), at 493433 to 494833
9505
mRNA_1138: 9506 - K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1, at 495296 to 498898
9506
mRNA_1139: 9507 - KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily, at 499455 to 501152
9507
mRNA_1140: 9508 - Hypothetical Protein, at 501144 to 502364
9508
mRNA_1141: 9509 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 502606 to 503454
9509
mRNA_1142: 9510 - K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta, at 503587 to 505304
9510
mRNA_1143: 9511 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 505667 to 510461
9511
mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510566 to 511961
9512
mRNA_1145: 9513 - K00669 AANAT arylalkylamine N-acetyltransferase, at 512734 to 513942
9513
mRNA_1146: 9514 - K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase, at 514392 to 515549
9514
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_1136
9504
Hypothetical Protein
-
cofit
mRNA_1137
9505
KOG2363 Protein subunit of nuclear ribonuclease P (RNase P)
-
420
no data
mRNA_1138
9506
K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1
+
463
no data
mRNA_1139
9507
KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily
+
557
insig.
mRNA_1140
9508
Hypothetical Protein
-
-8
cofit
mRNA_1141
9509
ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
+
242
cofit
mRNA_1142
9510
K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta
-
133
no data
mRNA_1143
9511
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
+
363
cofit
mRNA_1144
9512
K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial
-
105
cofit
mRNA_1145
9513
K00669 AANAT arylalkylamine N-acetyltransferase
-
773
cofit
mRNA_1146
9514
K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase
+
450
insig.