Gene info for mRNA_1139 in Rhodosporidium toruloides IFO0880

mRNA_1139 9507: KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily

Type 1: Protein-coding gene
Located on scaffold scaffold_10, + strand, nucleotides 499,455 to 501,152

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_1134: 9502 - K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B, at 486647 to 489747 9502 mRNA_1135: 9503 - K04532 NAE1, APPBP1 amyloid beta precursor protein binding protein 1, at 489828 to 492159 9503 mRNA_1136: 9504 - Hypothetical Protein, at 492324 to 493013 9504 mRNA_1137: 9505 - KOG2363 Protein subunit of nuclear ribonuclease P (RNase P), at 493433 to 494833 9505 mRNA_1138: 9506 - K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1, at 495296 to 498898 9506 mRNA_1139: 9507 - KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily, at 499455 to 501152 9507 mRNA_1140: 9508 - Hypothetical Protein, at 501144 to 502364 9508 mRNA_1141: 9509 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 502606 to 503454 9509 mRNA_1142: 9510 - K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta, at 503587 to 505304 9510 mRNA_1143: 9511 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 505667 to 510461 9511 mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510566 to 511961 9512
Locus Name Description Strand Distance (nt) Phenotype
mRNA_1134 9502 K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B - cofit
mRNA_1135 9503 K04532 NAE1, APPBP1 amyloid beta precursor protein binding protein 1 + 81 no data
mRNA_1136 9504 Hypothetical Protein - 165 cofit
mRNA_1137 9505 KOG2363 Protein subunit of nuclear ribonuclease P (RNase P) - 420 no data
mRNA_1138 9506 K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1 + 463 no data
mRNA_1139 9507 KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily + 557 insig.
mRNA_1140 9508 Hypothetical Protein - -8 cofit
mRNA_1141 9509 ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257 + 242 cofit
mRNA_1142 9510 K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta - 133 no data
mRNA_1143 9511 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + 363 cofit
mRNA_1144 9512 K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial - 105 cofit