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Gene info for mRNA_1026 in
Rhodosporidium toruloides IFO0880
mRNA_1026 9394:
HMMPfam-Protein of unknown function (DUF3317)-PF11779
Type 1: Protein-coding gene
Located on scaffold scaffold_10, + strand, nucleotides 233,944 to 234,631
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_1021: 9389 - KOG3457 Sec61 protein translocation complex, beta subunit, at 223629 to 224377
9389
mRNA_1022: 9390 - KOG1550 Extracellular protein SEL-1 and related proteins, at 224870 to 227887
9390
mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228517 to 230203
9391
mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230632 to 231986
9392
mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232781 to 233762
9393
mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233944 to 234631
9394
mRNA_1027: 9395 - Hypothetical Protein, at 235522 to 235827
9395
mRNA_1028: 9396 - HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371, at 236228 to 240194
9396
mRNA_1029: 9397 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 240232 to 241544
9397
mRNA_1030: 9398 - Hypothetical Protein, at 241956 to 242588
9398
mRNA_1031: 9399 - Hypothetical Protein, at 243665 to 244261
9399
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_1021
9389
KOG3457 Sec61 protein translocation complex, beta subunit
+
no data
mRNA_1022
9390
KOG1550 Extracellular protein SEL-1 and related proteins
+
493
cofit
mRNA_1023
9391
K08272 CAB39, MO25 calcium binding protein 39
+
630
no data
mRNA_1024
9392
HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870
-
429
cofit
mRNA_1025
9393
BLAST MIND kinetochore complex component Nnf1 [Trichophyton...
-
795
no data
mRNA_1026
9394
HMMPfam-Protein of unknown function (DUF3317)-PF11779
+
182
cofit
mRNA_1027
9395
Hypothetical Protein
-
891
cofit
mRNA_1028
9396
HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371
+
401
cofit
mRNA_1029
9397
SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083
-
38
cofit
mRNA_1030
9398
Hypothetical Protein
+
412
insig.
mRNA_1031
9399
Hypothetical Protein
+
1077
cofit