Gene info for mRNA_856 in Rhodosporidium toruloides IFO0880

mRNA_856 9224: KOG0828 Predicted E3 ubiquitin ligase

Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 2,049,968 to 2,053,108

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_851: 9219 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 2039418 to 2042658 9219 mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2042732 to 2043876 9220 mRNA_853: 9221 - K13125 NOSIP nitric oxide synthase-interacting protein, at 2044185 to 2045369 9221 mRNA_854: 9222 - K01620 ltaE threonine aldolase, at 2045445 to 2046969 9222 mRNA_855: 9223 - BLAST Phosphoribosyltransferase C-terminal [Ceraceosorus bo..., at 2047256 to 2049795 9223 mRNA_856: 9224 - KOG0828 Predicted E3 ubiquitin ligase, at 2049968 to 2053108 9224 mRNA_857: 9225 - K14565 NOP58 nucleolar protein 58, at 2053274 to 2055374 9225 mRNA_858: 9226 - K10599 PRPF19, PRP19 pre-mRNA-processing factor 19, at 2055879 to 2057799 9226 mRNA_859: 9227 - KOG1032 Uncharacterized conserved protein, contains GRAM domain, at 2057980 to 2061220 9227 mRNA_860: 9228 - HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268, at 2061433 to 2063574 9228 mRNA_861: 9229 - K03513 POLM DNA polymerase mu, at 2063792 to 2065447 9229
Locus Name Description Strand Distance (nt) Phenotype
mRNA_851 9219 HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474 + cofit
mRNA_852 9220 K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase - 74 no data
mRNA_853 9221 K13125 NOSIP nitric oxide synthase-interacting protein + 309 cofit
mRNA_854 9222 K01620 ltaE threonine aldolase - 76 cofit
mRNA_855 9223 BLAST Phosphoribosyltransferase C-terminal [Ceraceosorus bo... - 287 cofit
mRNA_856 9224 KOG0828 Predicted E3 ubiquitin ligase + 173 cofit
mRNA_857 9225 K14565 NOP58 nucleolar protein 58 - 166 no data
mRNA_858 9226 K10599 PRPF19, PRP19 pre-mRNA-processing factor 19 + 505 cofit
mRNA_859 9227 KOG1032 Uncharacterized conserved protein, contains GRAM domain + 181 cofit
mRNA_860 9228 HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268 - 213 cofit
mRNA_861 9229 K03513 POLM DNA polymerase mu - 218 cofit