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Gene info for mRNA_796 in
Rhodosporidium toruloides IFO0880
mRNA_796 9164:
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 1,893,932 to 1,897,116
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_791: 9159 - HMMPfam-Svf1-like-PF08622,SUPERFAMILY--SSF159245, at 1880384 to 1881933
9159
mRNA_792: 9160 - SUPERFAMILY--SSF52047, at 1882610 to 1885727
9160
mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1885981 to 1887715
9161
mRNA_794: 9162 - K14834 NOC3 nucleolar complex protein 3, at 1887871 to 1891135
9162
mRNA_795: 9163 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1891240 to 1893546
9163
mRNA_796: 9164 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1893932 to 1897116
9164
mRNA_797: 9165 - K02265 COX5B cytochrome c oxidase subunit 5b, at 1897731 to 1898518
9165
mRNA_798: 9166 - K15376 GPHN gephyrin, at 1898956 to 1901377
9166
mRNA_799: 9167 - K01893 NARS, asnS asparaginyl-tRNA synthetase, at 1901722 to 1903948
9167
mRNA_800: 9168 - K10418 DYNLL dynein light chain LC8-type, at 1904399 to 1905250
9168
mRNA_801: 9169 - SUPERFAMILY--SSF52047, at 1905465 to 1906798
9169
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_791
9159
HMMPfam-Svf1-like-PF08622,SUPERFAMILY--SSF159245
-
no data
mRNA_792
9160
SUPERFAMILY--SSF52047
-
677
cofit
mRNA_793
9161
KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit
+
254
insig.
mRNA_794
9162
K14834 NOC3 nucleolar complex protein 3
+
156
no data
mRNA_795
9163
KOG0137 Very-long-chain acyl-CoA dehydrogenase
-
105
cofit
mRNA_796
9164
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
+
386
cofit
mRNA_797
9165
K02265 COX5B cytochrome c oxidase subunit 5b
+
615
cofit
mRNA_798
9166
K15376 GPHN gephyrin
-
438
cofit
mRNA_799
9167
K01893 NARS, asnS asparaginyl-tRNA synthetase
-
345
no data
mRNA_800
9168
K10418 DYNLL dynein light chain LC8-type
-
451
no data
mRNA_801
9169
SUPERFAMILY--SSF52047
+
215
cofit