Gene info for mRNA_478 in Rhodosporidium toruloides IFO0880

mRNA_478 8846: HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452

Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 1,111,046 to 1,113,487

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_473: 8841 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1099546 to 1101190 8841 mRNA_474: 8842 - Hypothetical Protein, at 1101905 to 1103305 8842 mRNA_475: 8843 - K15153 MED31, SOH1 mediator of RNA polymerase II transcription subunit 31, at 1103672 to 1105927 8843 mRNA_476: 8844 - K02951 RP-S12e, RPS12 small subunit ribosomal protein S12e, at 1106447 to 1107237 8844 mRNA_477: 8845 - K10256 FAD2 omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase), at 1108768 to 1110470 8845 mRNA_478: 8846 - HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1111046 to 1113487 8846 mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1114132 to 1117214 8847 mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1117742 to 1121401 8848 mRNA_481: 8849 - K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2, at 1121651 to 1124733 8849 mRNA_482: 8850 - Hypothetical Protein, at 1146719 to 1146997 8850 mRNA_483: 8851 - KOG1339 Aspartyl protease, at 1150104 to 1151338 8851
Locus Name Description Strand Distance (nt) Phenotype
mRNA_473 8841 K15255 PIF1 ATP-dependent DNA helicase PIF1 - cofit
mRNA_474 8842 Hypothetical Protein - 715 cofit
mRNA_475 8843 K15153 MED31, SOH1 mediator of RNA polymerase II transcription subunit 31 - 367 cofit
mRNA_476 8844 K02951 RP-S12e, RPS12 small subunit ribosomal protein S12e + 520 no data
mRNA_477 8845 K10256 FAD2 omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) - 1531 no data
mRNA_478 8846 HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452 - 576 insig.
mRNA_479 8847 K17302 COPB2, SEC27 coatomer subunit beta' - 645 no data
mRNA_480 8848 ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689 + 528 cofit
mRNA_481 8849 K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2 - 250 insig.
mRNA_482 8850 Hypothetical Protein - 21986 cofit
mRNA_483 8851 KOG1339 Aspartyl protease - 3107 cofit