Gene info for mRNA_273 in Rhodosporidium toruloides IFO0880

mRNA_273 8641: K15174 PAF1 RNA polymerase II-associated factor 1

Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 655,778 to 657,591

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642489 to 643919 8636 mRNA_269: 8637 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 644049 to 645349 8637 mRNA_270: 8638 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 645622 to 646120 8638 mRNA_271: 8639 - K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1, at 646438 to 653784 8639 mRNA_272: 8640 - KOG4178 Soluble epoxide hydrolase, at 654316 to 655397 8640 mRNA_273: 8641 - K15174 PAF1 RNA polymerase II-associated factor 1, at 655778 to 657591 8641 mRNA_274: 8642 - BLAST Putative Pc16g06240 protein [Torrubiella hemipterigena], at 657663 to 658330 8642 mRNA_275: 8643 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 659442 to 660346 8643 mRNA_276: 8644 - K03679 RRP4, EXOSC2 exosome complex component RRP4, at 660577 to 661885 8644 mRNA_277: 8645 - KOG3122 DNA-directed RNA polymerase III subunit, at 662977 to 664495 8645 mRNA_278: 8646 - K03134 TAF10 transcription initiation factor TFIID subunit 10, at 664753 to 665683 8646
Locus Name Description Strand Distance (nt) Phenotype
mRNA_268 8636 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + insig.
mRNA_269 8637 BLAST nitrogen assimilation transcription factor [Rhodo... + 130 cofit
mRNA_270 8638 BLAST protein of unknown function [Taphrina deformans PYCC ... - 273 no data
mRNA_271 8639 K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1 - 318 no data
mRNA_272 8640 KOG4178 Soluble epoxide hydrolase - 532 cofit
mRNA_273 8641 K15174 PAF1 RNA polymerase II-associated factor 1 + 381 cofit
mRNA_274 8642 BLAST Putative Pc16g06240 protein [Torrubiella hemipterigena] + 72 cofit
mRNA_275 8643 BLAST nitrogen assimilation transcription factor [Rhodo... - 1112 cofit
mRNA_276 8644 K03679 RRP4, EXOSC2 exosome complex component RRP4 - 231 no data
mRNA_277 8645 KOG3122 DNA-directed RNA polymerase III subunit + 1092 no data
mRNA_278 8646 K03134 TAF10 transcription initiation factor TFIID subunit 10 - 258 no data