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Gene info for mRNA_269 in
Rhodosporidium toruloides IFO0880
mRNA_269 8637:
BLAST nitrogen assimilation transcription factor [Rhodo...
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 644,049 to 645,349
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_264: 8632 - BLAST phosphoglycerate mutase-like protein [Sanghuangporus ..., at 636296 to 637192
8632
mRNA_265: 8633 - K00876 udk, UCK uridine kinase, at 637479 to 639717
8633
mRNA_266: 8634 - KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, at 639859 to 640522
8634
mRNA_267: 8635 - K03381 catA catechol 1,2-dioxygenase, at 640868 to 642235
8635
mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642489 to 643919
8636
mRNA_269: 8637 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 644049 to 645349
8637
mRNA_270: 8638 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 645622 to 646120
8638
mRNA_271: 8639 - K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1, at 646438 to 653784
8639
mRNA_272: 8640 - KOG4178 Soluble epoxide hydrolase, at 654316 to 655397
8640
mRNA_273: 8641 - K15174 PAF1 RNA polymerase II-associated factor 1, at 655778 to 657591
8641
mRNA_274: 8642 - BLAST Putative Pc16g06240 protein [Torrubiella hemipterigena], at 657663 to 658330
8642
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_264
8632
BLAST phosphoglycerate mutase-like protein [Sanghuangporus ...
+
cofit
mRNA_265
8633
K00876 udk, UCK uridine kinase
+
287
cofit
mRNA_266
8634
KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase
-
142
no data
mRNA_267
8635
K03381 catA catechol 1,2-dioxygenase
-
346
insig.
mRNA_268
8636
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
+
254
insig.
mRNA_269
8637
BLAST nitrogen assimilation transcription factor [Rhodo...
+
130
cofit
mRNA_270
8638
BLAST protein of unknown function [Taphrina deformans PYCC ...
-
273
no data
mRNA_271
8639
K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1
-
318
no data
mRNA_272
8640
KOG4178 Soluble epoxide hydrolase
-
532
cofit
mRNA_273
8641
K15174 PAF1 RNA polymerase II-associated factor 1
+
381
cofit
mRNA_274
8642
BLAST Putative Pc16g06240 protein [Torrubiella hemipterigena]
+
72
cofit