Gene info for mRNA_102 in Rhodosporidium toruloides IFO0880

mRNA_102 8470: HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679

Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 247,531 to 248,783

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229785 to 233167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233874 to 234659 8466 mRNA_99: 8467 - HMMPfam-Fungal cellulose binding domain-PF00734,HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-Coagulation factors 5/8 type C domain (FA58C) profile.-PS50022,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF57180, at 235594 to 240654 8467 mRNA_100: 8468 - K03686 dnaJ molecular chaperone DnaJ, at 241337 to 243142 8468 mRNA_101: 8469 - K18719 NUP82 nucleoporin NUP82, at 243748 to 246867 8469 mRNA_102: 8470 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 247531 to 248783 8470 mRNA_103: 8471 - Hypothetical Protein, at 248905 to 249863 8471 mRNA_104: 8472 - Hypothetical Protein, at 250227 to 251681 8472 mRNA_105: 8473 - K08504 BET1 blocked early in transport 1, at 251697 to 252245 8473 mRNA_106: 8474 - K15201 GTP3C3, TFC4 general transcription factor 3C polypeptide 3 (transcription factor C subunit 4), at 252623 to 256756 8474 mRNA_107: 8475 - K08592 SENP1 sentrin-specific protease 1, at 257033 to 257891 8475
Locus Name Description Strand Distance (nt) Phenotype
mRNA_97 8465 KOG2234 Predicted UDP-galactose transporter - cofit
mRNA_98 8466 Hypothetical Protein - 707 insig.
mRNA_99 8467 HMMPfam-Fungal cellulose binding domain-PF00734,HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-Coagulation factors 5/8 type C domain (FA58C) profile.-PS50022,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF57180 + 935 cofit
mRNA_100 8468 K03686 dnaJ molecular chaperone DnaJ - 683 no data
mRNA_101 8469 K18719 NUP82 nucleoporin NUP82 + 606 no data
mRNA_102 8470 HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679 + 664 cofit
mRNA_103 8471 Hypothetical Protein - 122 cofit
mRNA_104 8472 Hypothetical Protein - 364 cofit
mRNA_105 8473 K08504 BET1 blocked early in transport 1 - 16 no data
mRNA_106 8474 K15201 GTP3C3, TFC4 general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) + 378 no data
mRNA_107 8475 K08592 SENP1 sentrin-specific protease 1 - 277 no data