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Gene info for mRNA_8339 in
Rhodosporidium toruloides IFO0880
mRNA_8339 16707:
K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 972,438 to 973,571
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961362 to 964238
16702
mRNA_8335: 16703 - HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895, at 964932 to 965872
16703
mRNA_8336: 16704 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 966219 to 967737
16704
mRNA_8337: 16705 - K01267 DNPEP aspartyl aminopeptidase, at 968158 to 970145
16705
mRNA_8338: 16706 - Hypothetical Protein, at 970678 to 971361
16706
mRNA_8339: 16707 - K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase, at 972438 to 973571
16707
mRNA_8340: 16708 - K03254 EIF3A translation initiation factor 3 subunit A, at 973687 to 977357
16708
mRNA_8341: 16709 - K14569 BMS1 ribosome biogenesis protein BMS1, at 977558 to 981587
16709
mRNA_8342: 16710 - Hypothetical Protein, at 981863 to 982243
16710
mRNA_8343: 16711 - Hypothetical Protein, at 983086 to 983598
16711
mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984444 to 989069
16712
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_8334
16702
BLAST mtf1_muccl ame full transcription factor mtf1 [Licht...
-
cofit
mRNA_8335
16703
HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895
+
694
cofit
mRNA_8336
16704
KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase
-
347
insig.
mRNA_8337
16705
K01267 DNPEP aspartyl aminopeptidase
-
421
cofit
mRNA_8338
16706
Hypothetical Protein
-
533
cofit
mRNA_8339
16707
K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase
-
1077
cofit
mRNA_8340
16708
K03254 EIF3A translation initiation factor 3 subunit A
+
116
no data
mRNA_8341
16709
K14569 BMS1 ribosome biogenesis protein BMS1
+
201
no data
mRNA_8342
16710
Hypothetical Protein
-
276
no data
mRNA_8343
16711
Hypothetical Protein
+
843
cofit
mRNA_8344
16712
K20308 TRAPPC11 trafficking protein particle complex subunit 11
-
846
cofit