Gene info for mRNA_8023 in Rhodosporidium toruloides IFO0880

mRNA_8023 16391: HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978

Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 230,764 to 233,185

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_8018: 16386 - Hypothetical Protein, at 220418 to 221008 16386 mRNA_8019: 16387 - Hypothetical Protein, at 222905 to 224449 16387 mRNA_8020: 16388 - K19841 STE50 protein STE50, at 224633 to 227369 16388 mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227452 to 229516 16389 mRNA_8022: 16390 - BLAST Ubiquinone biosynthesis protein coq9, mitochondrial [..., at 229628 to 230640 16390 mRNA_8023: 16391 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 230764 to 233185 16391 mRNA_8024: 16392 - K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5, at 233351 to 234544 16392 mRNA_8025: 16393 - KOG0118 FOG RRM domain, at 235031 to 239261 16393 mRNA_8026: 16394 - K03515 REV1 DNA repair protein REV1, at 239573 to 243561 16394 mRNA_8027: 16395 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 243826 to 244717 16395 mRNA_8028: 16396 - K06100 SYMPK symplekin, at 244729 to 248815 16396
Locus Name Description Strand Distance (nt) Phenotype
mRNA_8018 16386 Hypothetical Protein - cofit
mRNA_8019 16387 Hypothetical Protein - 1897 cofit
mRNA_8020 16388 K19841 STE50 protein STE50 + 184 cofit
mRNA_8021 16389 HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905 - 83 insig.
mRNA_8022 16390 BLAST Ubiquinone biosynthesis protein coq9, mitochondrial [... + 112 no data
mRNA_8023 16391 HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 - 124 cofit
mRNA_8024 16392 K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5 - 166 no data
mRNA_8025 16393 KOG0118 FOG RRM domain + 487 cofit
mRNA_8026 16394 K03515 REV1 DNA repair protein REV1 + 312 insig.
mRNA_8027 16395 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 + 265 insig.
mRNA_8028 16396 K06100 SYMPK symplekin - 12 no data