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Gene info for mRNA_7986 in
Rhodosporidium toruloides IFO0880
mRNA_7986 16354:
ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 151,105 to 154,451
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_7981: 16349 - KOG2504 Monocarboxylate transporter, at 141526 to 143466
16349
mRNA_7982: 16350 - KOG2504 Monocarboxylate transporter, at 144302 to 146236
16350
mRNA_7983: 16351 - K11495 CENPA histone H3-like centromeric protein A, at 146658 to 147555
16351
mRNA_7984: 16352 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 147825 to 148945
16352
mRNA_7985: 16353 - K15440 TAD1, ADAT1 tRNA-specific adenosine deaminase 1, at 149093 to 150954
16353
mRNA_7986: 16354 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 151105 to 154451
16354
mRNA_7987: 16355 - SUPERFAMILY--SSF144232, at 155023 to 156185
16355
mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156478 to 157308
16356
mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694
16357
mRNA_7990: 16358 - Hypothetical Protein, at 159249 to 159873
16358
mRNA_7991: 16359 - K02132 ATPeF1A, ATP5A1, ATP1 F-type H+-transporting ATPase subunit alpha, at 160884 to 163546
16359
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_7981
16349
KOG2504 Monocarboxylate transporter
-
cofit
mRNA_7982
16350
KOG2504 Monocarboxylate transporter
-
836
cofit
mRNA_7983
16351
K11495 CENPA histone H3-like centromeric protein A
+
422
no data
mRNA_7984
16352
KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family
-
270
cofit
mRNA_7985
16353
K15440 TAD1, ADAT1 tRNA-specific adenosine deaminase 1
+
148
cofit
mRNA_7986
16354
ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
-
151
cofit
mRNA_7987
16355
SUPERFAMILY--SSF144232
-
572
cofit
mRNA_7988
16356
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
+
293
cofit
mRNA_7989
16357
HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232
-
645
cofit
mRNA_7990
16358
Hypothetical Protein
+
555
cofit
mRNA_7991
16359
K02132 ATPeF1A, ATP5A1, ATP1 F-type H+-transporting ATPase subunit alpha
+
1011
no data