Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Gene info for mRNA_7942 in
Rhodosporidium toruloides IFO0880
mRNA_7942 16310:
K12824 TCERG1, CA150 transcription elongation regulator 1
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 62,103 to 65,141
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_7937: 16305 - KOG0550 Molecular chaperone (DnaJ superfamily), at 53529 to 55424
16305
mRNA_7938: 16306 - Hypothetical Protein, at 55876 to 58183
16306
mRNA_7939: 16307 - Hypothetical Protein, at 58388 to 59651
16307
mRNA_7940: 16308 - Hypothetical Protein, at 60107 to 61381
16308
mRNA_7941: 16309 - Hypothetical Protein, at 61623 to 61945
16309
mRNA_7942: 16310 - K12824 TCERG1, CA150 transcription elongation regulator 1, at 62103 to 65141
16310
mRNA_7943: 16311 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 65547 to 69135
16311
mRNA_7944: 16312 - Hypothetical Protein, at 69518 to 70390
16312
mRNA_7945: 16313 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 70630 to 71509
16313
mRNA_7946: 16314 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 71933 to 72812
16314
mRNA_7947: 16315 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 73248 to 74114
16315
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_7937
16305
KOG0550 Molecular chaperone (DnaJ superfamily)
+
cofit
mRNA_7938
16306
Hypothetical Protein
-
452
cofit
mRNA_7939
16307
Hypothetical Protein
+
205
cofit
mRNA_7940
16308
Hypothetical Protein
-
456
insig.
mRNA_7941
16309
Hypothetical Protein
+
242
cofit
mRNA_7942
16310
K12824 TCERG1, CA150 transcription elongation regulator 1
-
158
cofit
mRNA_7943
16311
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
-
406
cofit
mRNA_7944
16312
Hypothetical Protein
+
383
cofit
mRNA_7945
16313
HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232
+
240
cofit
mRNA_7946
16314
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
+
424
cofit
mRNA_7947
16315
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
+
436
insig.