Gene info for mRNA_7111 in Rhodosporidium toruloides IFO0880

mRNA_7111 15479: Interpro Subunit 11 of the general transcription factor TFIIH

Type 1: Protein-coding gene
Located on scaffold scaffold_7, - strand, nucleotides 908,449 to 909,688

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895700 to 897201 15474 mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897416 to 899091 15475 mRNA_7108: 15476 - HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296, at 899228 to 903559 15476 mRNA_7109: 15477 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 903883 to 906158 15477 mRNA_7110: 15478 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 906529 to 908168 15478 mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908449 to 909688 15479 mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910088 to 911391 15480 mRNA_7113: 15481 - Hypothetical Protein, at 911603 to 912181 15481 mRNA_7114: 15482 - K00383 GSR, gor glutathione reductase (NADPH), at 913071 to 914998 15482 mRNA_7115: 15483 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 915636 to 918075 15483 mRNA_7116: 15484 - K04393 CDC42 cell division control protein 42, at 918589 to 919535 15484
Locus Name Description Strand Distance (nt) Phenotype
mRNA_7106 15474 K11313 SUPT3H, SPT3 transcription initiation protein SPT3 - insig.
mRNA_7107 15475 KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain + 215 cofit
mRNA_7108 15476 HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296 - 137 cofit
mRNA_7109 15477 HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 - 324 insig.
mRNA_7110 15478 HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735 - 371 cofit
mRNA_7111 15479 Interpro Subunit 11 of the general transcription factor TFIIH - 281 cofit
mRNA_7112 15480 Interpro DNA-directed RNA polymerase I subunit RPA34.5 0 + 400 cofit
mRNA_7113 15481 Hypothetical Protein - 212 cofit
mRNA_7114 15482 K00383 GSR, gor glutathione reductase (NADPH) - 890 no data
mRNA_7115 15483 K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH) - 638 strong
mRNA_7116 15484 K04393 CDC42 cell division control protein 42 - 514 strong