Gene info for mRNA_6657 in Rhodosporidium toruloides IFO0880

mRNA_6657 15025: K16302 CNNM metal transporter CNNM

Type 1: Protein-coding gene
Located on scaffold scaffold_6, - strand, nucleotides 1,363,504 to 1,366,738

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_6652: 15020 - K02975 RP-S25e, RPS25 small subunit ribosomal protein S25e, at 1352209 to 1353144 15020 mRNA_6653: 15021 - K04739 PRKAR cAMP-dependent protein kinase regulator, at 1354178 to 1355889 15021 mRNA_6654: 15022 - K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor, at 1356168 to 1357307 15022 mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1358691 to 1359757 15023 mRNA_6656: 15024 - KOG1674 Cyclin, at 1360120 to 1362447 15024 mRNA_6657: 15025 - K16302 CNNM metal transporter CNNM, at 1363504 to 1366738 15025 mRNA_6658: 15026 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1366899 to 1370407 15026 mRNA_6659: 15027 - K05663 ABC.ATM mitochondrial ABC transporter ATM, at 1370693 to 1373174 15027 mRNA_6660: 15028 - KOG1342 Histone deacetylase complex, catalytic component RPD3, at 1373866 to 1375485 15028 mRNA_6661: 15029 - K11699 RDR, RDRP RNA-dependent RNA polymerase, at 1375555 to 1377901 15029 mRNA_6662: 15030 - HMMPfam-G-patch domain-PF01585,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-RNA recognition motif-SM00360,SMART-glycine rich nucleic binding domain-SM00443,SUPERFAMILY--SSF54928, at 1379343 to 1382272 15030
Locus Name Description Strand Distance (nt) Phenotype
mRNA_6652 15020 K02975 RP-S25e, RPS25 small subunit ribosomal protein S25e - cofit
mRNA_6653 15021 K04739 PRKAR cAMP-dependent protein kinase regulator + 1034 no data
mRNA_6654 15022 K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor - 279 cofit
mRNA_6655 15023 Interpro Domain of unknown function (DUF1772) - 1384 insig.
mRNA_6656 15024 KOG1674 Cyclin - 363 cofit
mRNA_6657 15025 K16302 CNNM metal transporter CNNM - 1057 cofit
mRNA_6658 15026 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - 161 cofit
mRNA_6659 15027 K05663 ABC.ATM mitochondrial ABC transporter ATM - 286 no data
mRNA_6660 15028 KOG1342 Histone deacetylase complex, catalytic component RPD3 + 692 cofit
mRNA_6661 15029 K11699 RDR, RDRP RNA-dependent RNA polymerase - 70 insig.
mRNA_6662 15030 HMMPfam-G-patch domain-PF01585,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-RNA recognition motif-SM00360,SMART-glycine rich nucleic binding domain-SM00443,SUPERFAMILY--SSF54928 - 1442 insig.