Gene info for mRNA_6572 in Rhodosporidium toruloides IFO0880

mRNA_6572 14940: HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928

Type 1: Protein-coding gene
Located on scaffold scaffold_6, - strand, nucleotides 1,131,312 to 1,136,542

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_6567: 14935 - KOG2662 Magnesium transporters CorA family, at 1114168 to 1116354 14935 mRNA_6568: 14936 - BLAST Protein IWS1 homolog A [Rhizoctonia solani], at 1116813 to 1120702 14936 mRNA_6569: 14937 - K02978 RP-S27e, RPS27 small subunit ribosomal protein S27e, at 1122107 to 1122716 14937 mRNA_6570: 14938 - K09184 GATAF GATA-binding protein, other eukaryote, at 1123067 to 1127630 14938 mRNA_6571: 14939 - K11790 DTL, CDT2, DCAF2 denticleless, at 1128601 to 1130974 14939 mRNA_6572: 14940 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928, at 1131312 to 1136542 14940 mRNA_6573: 14941 - K20472 COPZ, RET3 coatomer subunit zeta, at 1136818 to 1137633 14941 mRNA_6574: 14942 - K18258 CRYM thiomorpholine-carboxylate dehydrogenase, at 1137954 to 1139326 14942 mRNA_6575: 14943 - KOG0440 Cell cycle-associated protein Mob1-1, at 1139810 to 1140979 14943 mRNA_6576: 14944 - K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3, at 1141433 to 1143037 14944 mRNA_6577: 14945 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160, at 1143397 to 1147463 14945
Locus Name Description Strand Distance (nt) Phenotype
mRNA_6567 14935 KOG2662 Magnesium transporters CorA family - cofit
mRNA_6568 14936 BLAST Protein IWS1 homolog A [Rhizoctonia solani] + 459 cofit
mRNA_6569 14937 K02978 RP-S27e, RPS27 small subunit ribosomal protein S27e + 1405 no data
mRNA_6570 14938 K09184 GATAF GATA-binding protein, other eukaryote - 351 cofit
mRNA_6571 14939 K11790 DTL, CDT2, DCAF2 denticleless - 971 cofit
mRNA_6572 14940 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928 - 338 insig.
mRNA_6573 14941 K20472 COPZ, RET3 coatomer subunit zeta + 276 no data
mRNA_6574 14942 K18258 CRYM thiomorpholine-carboxylate dehydrogenase - 321 cofit
mRNA_6575 14943 KOG0440 Cell cycle-associated protein Mob1-1 + 484 no data
mRNA_6576 14944 K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3 + 454 cofit
mRNA_6577 14945 ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160 + 360 cofit