Gene info for mRNA_6261 in Rhodosporidium toruloides IFO0880

mRNA_6261 14629: K09274 K09274 HMG box factor, other

Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 383,014 to 384,624

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_6256: 14624 - Hypothetical Protein, at 367934 to 368444 14624 mRNA_6257: 14625 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 368702 to 371060 14625 mRNA_6258: 14626 - K01687 ilvD dihydroxy-acid dehydratase, at 371903 to 374480 14626 mRNA_6259: 14627 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 374998 to 377098 14627 mRNA_6260: 14628 - HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631, at 377562 to 381779 14628 mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385089 to 388417 14630 mRNA_6263: 14631 - Hypothetical Protein, at 389857 to 392694 14631 mRNA_6264: 14632 - KOG1550 Extracellular protein SEL-1 and related proteins, at 392784 to 393598 14632 mRNA_6265: 14633 - K07897 RAB7A Ras-related protein Rab-7A, at 393970 to 395012 14633 mRNA_6266: 14634 - Hypothetical Protein, at 396556 to 399256 14634
Locus Name Description Strand Distance (nt) Phenotype
mRNA_6256 14624 Hypothetical Protein + cofit
mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + 258 cofit
mRNA_6258 14626 K01687 ilvD dihydroxy-acid dehydratase - 843 insig.
mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 + 518 cofit
mRNA_6260 14628 HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631 - 464 cofit
mRNA_6261 14629 K09274 K09274 HMG box factor, other + 1235 cofit
mRNA_6262 14630 SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753 - 465 cofit
mRNA_6263 14631 Hypothetical Protein + 1440 cofit
mRNA_6264 14632 KOG1550 Extracellular protein SEL-1 and related proteins + 90 insig.
mRNA_6265 14633 K07897 RAB7A Ras-related protein Rab-7A - 372 no data
mRNA_6266 14634 Hypothetical Protein - 1544 no data