Gene info for mRNA_6257 in Rhodosporidium toruloides IFO0880

mRNA_6257 14625: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701

Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 368,702 to 371,060

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_6252: 14620 - K10845 TTDA, GTF2H5, TFB5 TFIIH basal transcription factor complex TTD-A subunit, at 358832 to 359230 14620 mRNA_6253: 14621 - HMMPfam-FR47-like protein-PF08445,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 360247 to 361370 14621 mRNA_6254: 14622 - K20477 RGP1 RAB6A-GEF complex partner protein 2, at 361772 to 365441 14622 mRNA_6255: 14623 - K01452 E3.5.1.41 chitin deacetylase, at 365616 to 367386 14623 mRNA_6256: 14624 - Hypothetical Protein, at 367934 to 368444 14624 mRNA_6257: 14625 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 368702 to 371060 14625 mRNA_6258: 14626 - K01687 ilvD dihydroxy-acid dehydratase, at 371903 to 374480 14626 mRNA_6259: 14627 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 374998 to 377098 14627 mRNA_6260: 14628 - HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631, at 377562 to 381779 14628 mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385089 to 388417 14630
Locus Name Description Strand Distance (nt) Phenotype
mRNA_6252 14620 K10845 TTDA, GTF2H5, TFB5 TFIIH basal transcription factor complex TTD-A subunit - no data
mRNA_6253 14621 HMMPfam-FR47-like protein-PF08445,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729 + 1017 cofit
mRNA_6254 14622 K20477 RGP1 RAB6A-GEF complex partner protein 2 + 402 strong
mRNA_6255 14623 K01452 E3.5.1.41 chitin deacetylase - 175 cofit
mRNA_6256 14624 Hypothetical Protein + 548 cofit
mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + 258 cofit
mRNA_6258 14626 K01687 ilvD dihydroxy-acid dehydratase - 843 insig.
mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 + 518 cofit
mRNA_6260 14628 HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631 - 464 cofit
mRNA_6261 14629 K09274 K09274 HMG box factor, other + 1235 cofit
mRNA_6262 14630 SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753 - 465 cofit