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Gene info for mRNA_5948 in
Rhodosporidium toruloides IFO0880
mRNA_5948 14316:
HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 1,303,532 to 1,306,602
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_5943: 14311 - Hypothetical Protein, at 1292366 to 1293493
14311
mRNA_5944: 14312 - Hypothetical Protein, at 1293681 to 1295115
14312
mRNA_5945: 14313 - Hypothetical Protein, at 1295302 to 1296454
14313
mRNA_5946: 14314 - Hypothetical Protein, at 1296750 to 1297889
14314
mRNA_5947: 14315 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 1298029 to 1303055
14315
mRNA_5948: 14316 - HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1303532 to 1306602
14316
mRNA_5949: 14317 - K01046 E3.1.1.3 triacylglycerol lipase, at 1307472 to 1308620
14317
mRNA_5950: 14318 - KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain, at 1310261 to 1312291
14318
mRNA_5951: 14319 - HMMPfam-Peptidase of plants and bacteria-PF04450, at 1312489 to 1313415
14319
mRNA_5952: 14320 - K15198 BDP1, TFC5 transcription factor TFIIIB component B'', at 1313767 to 1316568
14320
mRNA_5953: 14321 - KOG2084 Predicted histone tail methylase containing SET domain, at 1316839 to 1317817
14321
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_5943
14311
Hypothetical Protein
+
cofit
mRNA_5944
14312
Hypothetical Protein
+
188
cofit
mRNA_5945
14313
Hypothetical Protein
+
187
cofit
mRNA_5946
14314
Hypothetical Protein
+
296
cofit
mRNA_5947
14315
KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily
+
140
cofit
mRNA_5948
14316
HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356
-
477
cofit
mRNA_5949
14317
K01046 E3.1.1.3 triacylglycerol lipase
-
870
no data
mRNA_5950
14318
KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain
-
1641
cofit
mRNA_5951
14319
HMMPfam-Peptidase of plants and bacteria-PF04450
+
198
insig.
mRNA_5952
14320
K15198 BDP1, TFC5 transcription factor TFIIIB component B''
+
352
no data
mRNA_5953
14321
KOG2084 Predicted histone tail methylase containing SET domain
+
271
insig.