Gene info for mRNA_5868 in Rhodosporidium toruloides IFO0880

mRNA_5868 14236: HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197

Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 1,123,241 to 1,124,381

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5863: 14231 - K09281 K09281 copper-fist transcription factor, at 1112014 to 1113676 14231 mRNA_5864: 14232 - K01322 PREP prolyl oligopeptidase, at 1113887 to 1116821 14232 mRNA_5865: 14233 - KOG0800 FOG Predicted E3 ubiquitin ligase, at 1117097 to 1118879 14233 mRNA_5866: 14234 - KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily), at 1119164 to 1122161 14234 mRNA_5867: 14235 - K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12, at 1122384 to 1123037 14235 mRNA_5868: 14236 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1123241 to 1124381 14236 mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1124723 to 1126548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1126742 to 1127263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1127844 to 1131373 14239 mRNA_5872: 14240 - HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233, at 1131493 to 1135652 14240 mRNA_5873: 14241 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 1136080 to 1137305 14241
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5863 14231 K09281 K09281 copper-fist transcription factor - cofit
mRNA_5864 14232 K01322 PREP prolyl oligopeptidase + 211 insig.
mRNA_5865 14233 KOG0800 FOG Predicted E3 ubiquitin ligase + 276 cofit
mRNA_5866 14234 KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) - 285 cofit
mRNA_5867 14235 K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12 + 223 no data
mRNA_5868 14236 HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 + 204 cofit
mRNA_5869 14237 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 - 342 no data
mRNA_5870 14238 Hypothetical Protein + 194 cofit
mRNA_5871 14239 HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850 - 581 cofit
mRNA_5872 14240 HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233 + 120 strong
mRNA_5873 14241 K00761 upp, UPRT uracil phosphoribosyltransferase + 428 cofit