Gene info for mRNA_5800 in Rhodosporidium toruloides IFO0880

mRNA_5800 14168: K11801 WDR23 WD repeat-containing protein 23

Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 970,023 to 972,593

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957855 to 959394 14163 mRNA_5796: 14164 - BLAST Protein of unknown function DUF4598 [Xanthophyllomyce..., at 959375 to 960569 14164 mRNA_5797: 14165 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 962183 to 965371 14165 mRNA_5798: 14166 - KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein, at 965628 to 966973 14166 mRNA_5799: 14167 - K09540 SEC63, DNAJC23 translocation protein SEC63, at 967190 to 969688 14167 mRNA_5800: 14168 - K11801 WDR23 WD repeat-containing protein 23, at 970023 to 972593 14168 mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972859 to 974663 14169 mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974820 to 975968 14170 mRNA_5803: 14171 - Hypothetical Protein, at 976295 to 977367 14171 mRNA_5804: 14172 - Hypothetical Protein, at 978003 to 978815 14172 mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979008 to 980217 14173
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5795 14163 KOG4842 Protein involved in sister chromatid separation and/or segregation + cofit
mRNA_5796 14164 BLAST Protein of unknown function DUF4598 [Xanthophyllomyce... - -19 cofit
mRNA_5797 14165 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + 1614 insig.
mRNA_5798 14166 KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein - 257 cofit
mRNA_5799 14167 K09540 SEC63, DNAJC23 translocation protein SEC63 - 217 no data
mRNA_5800 14168 K11801 WDR23 WD repeat-containing protein 23 - 335 insig.
mRNA_5801 14169 HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459 + 266 cofit
mRNA_5802 14170 K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase - 157 cofit
mRNA_5803 14171 Hypothetical Protein + 327 cofit
mRNA_5804 14172 Hypothetical Protein + 636 cofit
mRNA_5805 14173 HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324 - 193 cofit