Gene mRNA_5735 in Rhodosporidium toruloides IFO0880

mRNA_5735 14103: K12828 SF3B1, SAP155 splicing factor 3B subunit 1 in Rhodosporidium toruloides IFO0880

Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 807,499 to 811,509

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5730: 14098 - SUPERFAMILY--SSF47113, at 791039 to 793394 14098 mRNA_5731: 14099 - Hypothetical Protein, at 797618 to 798076 14099 mRNA_5732: 14100 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 798563 to 800717 14100 mRNA_5733: 14101 - KOG4197 FOG PPR repeat, at 800656 to 803521 14101 mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805175 to 807034 14102 mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807499 to 811509 14103 mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814354 to 815055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815382 to 817330 14106 mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818147 to 820488 14107 mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820937 to 822719 14108
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5730 14098 SUPERFAMILY--SSF47113 + cofit
mRNA_5731 14099 Hypothetical Protein - 4224 cofit
mRNA_5732 14100 HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959 + 487 strong
mRNA_5733 14101 KOG4197 FOG PPR repeat - -61 cofit
mRNA_5734 14102 K01183 E3.2.1.14 chitinase - 1654 cofit
mRNA_5735 14103 K12828 SF3B1, SAP155 splicing factor 3B subunit 1 - 465 no data
mRNA_5736 14104 K03250 EIF3E, INT6 translation initiation factor 3 subunit E - 565 no data
mRNA_5737 14105 HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157 - 486 cofit
mRNA_5738 14106 SUPERFAMILY--SSF54928 - 327 cofit
mRNA_5739 14107 K05692 ACTB_G1 actin beta/gamma 1 + 817 no data
mRNA_5740 14108 K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase + 449 insig.