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Gene info for mRNA_5702 in
Rhodosporidium toruloides IFO0880
mRNA_5702 14070:
K09478 ACADSB short/branched chain acyl-CoA dehydrogenase
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 721,912 to 723,848
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_5697: 14065 - K14568 EMG1, NEP1 rRNA small subunit pseudouridine methyltransferase Nep1, at 712124 to 713421
14065
mRNA_5698: 14066 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 714233 to 715636
14066
mRNA_5699: 14067 - HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300, at 716086 to 718925
14067
mRNA_5700: 14068 - KOG0143 Iron/ascorbate family oxidoreductases, at 719283 to 720938
14068
mRNA_5701: 14069 - K13120 FAM32A protein FAM32A, at 721042 to 721632
14069
mRNA_5702: 14070 - K09478 ACADSB short/branched chain acyl-CoA dehydrogenase, at 721912 to 723848
14070
mRNA_5703: 14071 - KOG1289 Amino acid transporters, at 724681 to 726988
14071
mRNA_5704: 14072 - KOG2483 Upstream transcription factor 2/L-myc-2 protein, at 728026 to 730424
14072
mRNA_5705: 14073 - HMMPfam-Cysteine-rich secretory protein family-PF00188,SUPERFAMILY--SSF55797, at 731059 to 731970
14073
mRNA_5706: 14074 - Hypothetical Protein, at 731945 to 733165
14074
mRNA_5707: 14075 - Hypothetical Protein, at 736463 to 742238
14075
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_5697
14065
K14568 EMG1, NEP1 rRNA small subunit pseudouridine methyltransferase Nep1
+
no data
mRNA_5698
14066
BLAST transmembrane protein, putative [Rhizoctonia solani A...
+
812
cofit
mRNA_5699
14067
HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300
-
450
cofit
mRNA_5700
14068
KOG0143 Iron/ascorbate family oxidoreductases
+
358
insig.
mRNA_5701
14069
K13120 FAM32A protein FAM32A
-
104
cofit
mRNA_5702
14070
K09478 ACADSB short/branched chain acyl-CoA dehydrogenase
+
280
strong
mRNA_5703
14071
KOG1289 Amino acid transporters
+
833
cofit
mRNA_5704
14072
KOG2483 Upstream transcription factor 2/L-myc-2 protein
+
1038
cofit
mRNA_5705
14073
HMMPfam-Cysteine-rich secretory protein family-PF00188,SUPERFAMILY--SSF55797
+
635
cofit
mRNA_5706
14074
Hypothetical Protein
-
-25
cofit
mRNA_5707
14075
Hypothetical Protein
+
3298
cofit