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Protein
Homologs
Gene mRNA_5627 in
Rhodosporidium toruloides IFO0880
mRNA_5627 13995: K10756 RFC3_5 replication factor C subunit 3/5 in Rhodosporidium toruloides IFO0880
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 539,729 to 541,360
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_5622: 13990 - K00849 galK galactokinase, at 531659 to 534063
13990
mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136
13991
mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555
13992
mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157
13993
mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538805 to 539634
13994
mRNA_5627: 13995 - K10756 RFC3_5 replication factor C subunit 3/5, at 539729 to 541360
13995
mRNA_5628: 13996 - SUPERFAMILY--SSF57997, at 541523 to 547167
13996
mRNA_5629: 13997 - K15430 TRM11, TRMT11 tRNA (guanine10-N2)-methyltransferase, at 547536 to 549644
13997
mRNA_5630: 13998 - HMMPfam-SUR7/PalI family-PF06687, at 549852 to 551893
13998
mRNA_5631: 13999 - KOG4197 FOG PPR repeat, at 552322 to 556680
13999
mRNA_5632: 14000 - Hypothetical Protein, at 557069 to 557641
14000
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_5622
13990
K00849 galK galactokinase
+
cofit
mRNA_5623
13991
KOG3393 Predicted membrane protein
-
218
cofit
mRNA_5624
13992
KOG1611 Predicted short chain-type dehydrogenase
+
617
cofit
mRNA_5625
13993
KOG1611 Predicted short chain-type dehydrogenase
+
775
cofit
mRNA_5626
13994
KOG1611 Predicted short chain-type dehydrogenase
+
648
cofit
mRNA_5627
13995
K10756 RFC3_5 replication factor C subunit 3/5
-
95
no data
mRNA_5628
13996
SUPERFAMILY--SSF57997
-
163
insig.
mRNA_5629
13997
K15430 TRM11, TRMT11 tRNA (guanine10-N2)-methyltransferase
+
369
cofit
mRNA_5630
13998
HMMPfam-SUR7/PalI family-PF06687
-
208
cofit
mRNA_5631
13999
KOG4197 FOG PPR repeat
+
429
cofit
mRNA_5632
14000
Hypothetical Protein
+
389
cofit