Gene info for mRNA_5607 in Rhodosporidium toruloides IFO0880

mRNA_5607 13975: HMMPfam-rRNA processing-PF08524

Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 492,643 to 493,643

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5602: 13970 - HMMPfam-AAA-ATPase Vps4-associated protein 1-PF08432, at 483682 to 484493 13970 mRNA_5603: 13971 - K09523 DNAJC3 DnaJ homolog subfamily C member 3, at 484833 to 486890 13971 mRNA_5604: 13972 - Hypothetical Protein, at 487257 to 489515 13972 mRNA_5605: 13973 - Hypothetical Protein, at 489927 to 490531 13973 mRNA_5606: 13974 - HMMPfam-Glycosyl hydrolase family 61-PF03443, at 490691 to 492139 13974 mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492643 to 493643 13975 mRNA_5608: 13976 - K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1, at 494885 to 501857 13976 mRNA_5609: 13977 - HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058, at 502227 to 504581 13977 mRNA_5610: 13978 - KOG1611 Predicted short chain-type dehydrogenase, at 504670 to 507396 13978 mRNA_5611: 13979 - HMMPfam-Protein of unknown function (DUF2433)-PF10360, at 507663 to 510497 13979 mRNA_5612: 13980 - K14213 PEPD Xaa-Pro dipeptidase, at 510647 to 512391 13980
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5602 13970 HMMPfam-AAA-ATPase Vps4-associated protein 1-PF08432 - no data
mRNA_5603 13971 K09523 DNAJC3 DnaJ homolog subfamily C member 3 + 340 cofit
mRNA_5604 13972 Hypothetical Protein + 367 cofit
mRNA_5605 13973 Hypothetical Protein + 412 no data
mRNA_5606 13974 HMMPfam-Glycosyl hydrolase family 61-PF03443 - 160 cofit
mRNA_5607 13975 HMMPfam-rRNA processing-PF08524 + 504 cofit
mRNA_5608 13976 K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1 - 1242 cofit
mRNA_5609 13977 HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058 + 370 cofit
mRNA_5610 13978 KOG1611 Predicted short chain-type dehydrogenase - 89 insig.
mRNA_5611 13979 HMMPfam-Protein of unknown function (DUF2433)-PF10360 + 267 cofit
mRNA_5612 13980 K14213 PEPD Xaa-Pro dipeptidase - 150 cofit