Gene info for mRNA_5586 in Rhodosporidium toruloides IFO0880

mRNA_5586 13954: HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874

Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 440,845 to 442,225

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5581: 13949 - KOG1198 Zinc-binding oxidoreductase, at 426490 to 430753 13949 mRNA_5582: 13950 - KOG0254 Predicted transporter (major facilitator superfamily), at 431120 to 432974 13950 mRNA_5583: 13951 - BLAST putative ATP-dependent RNA helicase DHR1 [Wallemi..., at 433423 to 434660 13951 mRNA_5584: 13952 - K14780 DHX37, DHR1 ATP-dependent RNA helicase DHX37/DHR1, at 434778 to 438176 13952 mRNA_5585: 13953 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 438946 to 439812 13953 mRNA_5586: 13954 - HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874, at 440845 to 442225 13954 mRNA_5587: 13955 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 442460 to 444934 13955 mRNA_5588: 13956 - K04646 CLTC clathrin heavy chain, at 445345 to 451026 13956 mRNA_5589: 13957 - HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371, at 452647 to 453380 13957 mRNA_5590: 13958 - K11137 TELO2, TEL2 telomere length regulation protein, at 453497 to 457057 13958 mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343 13959
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5581 13949 KOG1198 Zinc-binding oxidoreductase + cofit
mRNA_5582 13950 KOG0254 Predicted transporter (major facilitator superfamily) - 367 cofit
mRNA_5583 13951 BLAST putative ATP-dependent RNA helicase DHR1 [Wallemi... + 449 no data
mRNA_5584 13952 K14780 DHX37, DHR1 ATP-dependent RNA helicase DHX37/DHR1 + 118 no data
mRNA_5585 13953 HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277 + 770 cofit
mRNA_5586 13954 HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874 + 1033 cofit
mRNA_5587 13955 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + 235 cofit
mRNA_5588 13956 K04646 CLTC clathrin heavy chain + 411 no data
mRNA_5589 13957 HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371 + 1621 cofit
mRNA_5590 13958 K11137 TELO2, TEL2 telomere length regulation protein - 117 no data
mRNA_5591 13959 K11182 AOC1, ABP1 diamine oxidase + 1072 cofit