Gene info for mRNA_5479 in Rhodosporidium toruloides IFO0880

mRNA_5479 13847: KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing

Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 194,806 to 195,878

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5474: 13842 - HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690, at 180960 to 181593 13842 mRNA_5475: 13843 - KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins, at 181752 to 183361 13843 mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183800 to 188314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188584 to 192714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192866 to 194409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194806 to 195878 13847 mRNA_5480: 13848 - Hypothetical Protein, at 198378 to 198864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201045 to 202061 13850 mRNA_5483: 13851 - KOG1339 Aspartyl protease, at 202681 to 205111 13851 mRNA_5484: 13852 - K16612 HOOK1 protein HOOK1, at 205499 to 209113 13852
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5474 13842 HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690 + no data
mRNA_5475 13843 KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins + 159 cofit
mRNA_5476 13844 KOG4719 Nuclear pore complex protein + 439 cofit
mRNA_5477 13845 K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11 + 270 cofit
mRNA_5478 13846 SUPERFAMILY--SSF81383 + 152 cofit
mRNA_5479 13847 KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing - 397 insig.
mRNA_5480 13848 Hypothetical Protein - 2500 insig.
mRNA_5481 13849 KOG2710 Rho GTPase-activating protein - 468 cofit
mRNA_5482 13850 Hypothetical Protein - 373 insig.
mRNA_5483 13851 KOG1339 Aspartyl protease + 620 strong
mRNA_5484 13852 K16612 HOOK1 protein HOOK1 + 388 cofit