Gene info for mRNA_5412 in Rhodosporidium toruloides IFO0880

mRNA_5412 13780: ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112

Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 41,309 to 43,272

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5407: 13775 - K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+), at 28474 to 30165 13775 mRNA_5408: 13776 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 30441 to 31506 13776 mRNA_5409: 13777 - Hypothetical Protein, at 32747 to 36067 13777 mRNA_5410: 13778 - KOG2952 Cell cycle control protein, at 37061 to 38634 13778 mRNA_5411: 13779 - K03251 EIF3D translation initiation factor 3 subunit D, at 39180 to 41133 13779 mRNA_5412: 13780 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 41309 to 43272 13780 mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43823 to 46039 13781 mRNA_5414: 13782 - HMMPfam-Glycosyl transferase family 2-PF13704, at 46162 to 47875 13782 mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48943 to 50652 13783 mRNA_5416: 13784 - K04496 CTBP C-terminal binding protein, at 52502 to 53852 13784 mRNA_5417: 13785 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 53998 to 56725 13785
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5407 13775 K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+) - no data
mRNA_5408 13776 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 - 276 cofit
mRNA_5409 13777 Hypothetical Protein - 1241 cofit
mRNA_5410 13778 KOG2952 Cell cycle control protein + 994 no data
mRNA_5411 13779 K03251 EIF3D translation initiation factor 3 subunit D + 546 no data
mRNA_5412 13780 ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 - 176 cofit
mRNA_5413 13781 ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 - 551 cofit
mRNA_5414 13782 HMMPfam-Glycosyl transferase family 2-PF13704 + 123 cofit
mRNA_5415 13783 HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024 + 1068 insig.
mRNA_5416 13784 K04496 CTBP C-terminal binding protein + 1850 cofit
mRNA_5417 13785 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - 146 cofit