Gene info for mRNA_5248 in Rhodosporidium toruloides IFO0880

mRNA_5248 13616: KOG2084 Predicted histone tail methylase containing SET domain

Type 1: Protein-coding gene
Located on scaffold scaffold_4, - strand, nucleotides 258,879 to 260,199

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5243: 13611 - KOG1601 GATA-4/5/6 transcription factors, at 247199 to 251043 13611 mRNA_5244: 13612 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 251965 to 253364 13612 mRNA_5245: 13613 - KOG2887 Membrane protein involved in ER to Golgi transport, at 253942 to 254889 13613 mRNA_5246: 13614 - K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit, at 255112 to 256642 13614 mRNA_5247: 13615 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 256939 to 258074 13615 mRNA_5248: 13616 - KOG2084 Predicted histone tail methylase containing SET domain, at 258879 to 260199 13616 mRNA_5249: 13617 - K01535 PMA1, PMA2 H+-transporting ATPase, at 260649 to 264628 13617 mRNA_5250: 13618 - SUPERFAMILY--SSF101898, at 267361 to 271776 13618 mRNA_5251: 13619 - K12867 SYF1, XAB2 pre-mRNA-splicing factor SYF1, at 271974 to 275743 13619 mRNA_5252: 13620 - BLAST LPS-assembly protein LptD [Rhizoctonia solani], at 276429 to 278610 13620 mRNA_5253: 13621 - Hypothetical Protein, at 278991 to 279822 13621
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5243 13611 KOG1601 GATA-4/5/6 transcription factors + cofit
mRNA_5244 13612 HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208 + 922 cofit
mRNA_5245 13613 KOG2887 Membrane protein involved in ER to Golgi transport + 578 no data
mRNA_5246 13614 K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit + 223 cofit
mRNA_5247 13615 HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 - 297 cofit
mRNA_5248 13616 KOG2084 Predicted histone tail methylase containing SET domain - 805 cofit
mRNA_5249 13617 K01535 PMA1, PMA2 H+-transporting ATPase - 450 no data
mRNA_5250 13618 SUPERFAMILY--SSF101898 - 2733 cofit
mRNA_5251 13619 K12867 SYF1, XAB2 pre-mRNA-splicing factor SYF1 - 198 cofit
mRNA_5252 13620 BLAST LPS-assembly protein LptD [Rhizoctonia solani] + 686 cofit
mRNA_5253 13621 Hypothetical Protein - 381 cofit