Gene info for mRNA_5244 in Rhodosporidium toruloides IFO0880

mRNA_5244 13612: HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208

Type 1: Protein-coding gene
Located on scaffold scaffold_4, + strand, nucleotides 251,965 to 253,364

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5239: 13607 - K10859 ALKBH2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, at 236624 to 237646 13607 mRNA_5240: 13608 - HMMPfam-Ubiquinol-cytochrome-c reductase complex subunit (QCR10)-PF09796, at 238020 to 238702 13608 mRNA_5241: 13609 - K01099 INPP5B_F inositol polyphosphate 5-phosphatase INPP5B/F, at 238987 to 242229 13609 mRNA_5242: 13610 - K02932 RP-L5e, RPL5 large subunit ribosomal protein L5e, at 243253 to 244505 13610 mRNA_5243: 13611 - KOG1601 GATA-4/5/6 transcription factors, at 247199 to 251043 13611 mRNA_5244: 13612 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 251965 to 253364 13612 mRNA_5245: 13613 - KOG2887 Membrane protein involved in ER to Golgi transport, at 253942 to 254889 13613 mRNA_5246: 13614 - K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit, at 255112 to 256642 13614 mRNA_5247: 13615 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 256939 to 258074 13615 mRNA_5248: 13616 - KOG2084 Predicted histone tail methylase containing SET domain, at 258879 to 260199 13616 mRNA_5249: 13617 - K01535 PMA1, PMA2 H+-transporting ATPase, at 260649 to 264628 13617
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5239 13607 K10859 ALKBH2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 - insig.
mRNA_5240 13608 HMMPfam-Ubiquinol-cytochrome-c reductase complex subunit (QCR10)-PF09796 + 374 cofit
mRNA_5241 13609 K01099 INPP5B_F inositol polyphosphate 5-phosphatase INPP5B/F - 285 cofit
mRNA_5242 13610 K02932 RP-L5e, RPL5 large subunit ribosomal protein L5e - 1024 no data
mRNA_5243 13611 KOG1601 GATA-4/5/6 transcription factors + 2694 cofit
mRNA_5244 13612 HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208 + 922 cofit
mRNA_5245 13613 KOG2887 Membrane protein involved in ER to Golgi transport + 578 no data
mRNA_5246 13614 K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit + 223 cofit
mRNA_5247 13615 HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 - 297 cofit
mRNA_5248 13616 KOG2084 Predicted histone tail methylase containing SET domain - 805 cofit
mRNA_5249 13617 K01535 PMA1, PMA2 H+-transporting ATPase - 450 no data