Gene info for mRNA_5157 in Rhodosporidium toruloides IFO0880

mRNA_5157 13525: K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216

Type 1: Protein-coding gene
Located on scaffold scaffold_4, - strand, nucleotides 36,318 to 38,711

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5152: 13520 - HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281, at 24796 to 26164 13520 mRNA_5153: 13521 - HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474, at 26390 to 28027 13521 mRNA_5154: 13522 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281, at 28775 to 30256 13522 mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30718 to 32151 13523 mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32964 to 35897 13524 mRNA_5157: 13525 - K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216, at 36318 to 38711 13525 mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39677 to 40567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41390 to 42543 13527 mRNA_5160: 13528 - Hypothetical Protein, at 43089 to 43847 13528 mRNA_5161: 13529 - Hypothetical Protein, at 44917 to 45595 13529 mRNA_5162: 13530 - Hypothetical Protein, at 46391 to 47176 13530
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5152 13520 HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281 - insig.
mRNA_5153 13521 HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474 - 226 cofit
mRNA_5154 13522 HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281 + 748 insig.
mRNA_5155 13523 BLAST unknown [Tremella fuciformis] - 462 cofit
mRNA_5156 13524 K00108 betA, CHDH choline dehydrogenase + 813 insig.
mRNA_5157 13525 K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216 - 421 cofit
mRNA_5158 13526 K15128 MED6 mediator of RNA polymerase II transcription subunit 6 - 966 no data
mRNA_5159 13527 Hypothetical Protein + 823 cofit
mRNA_5160 13528 Hypothetical Protein + 546 cofit
mRNA_5161 13529 Hypothetical Protein + 1070 cofit
mRNA_5162 13530 Hypothetical Protein + 796 cofit