Gene info for mRNA_5154 in Rhodosporidium toruloides IFO0880

mRNA_5154 13522: HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281

Type 1: Protein-coding gene
Located on scaffold scaffold_4, + strand, nucleotides 28,775 to 30,256

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_5149: 13517 - Hypothetical Protein, at 18880 to 20047 13517 mRNA_5150: 13518 - Hypothetical Protein, at 20329 to 21379 13518 mRNA_5151: 13519 - HMMPfam-SUR7/PalI family-PF06687, at 22943 to 24220 13519 mRNA_5152: 13520 - HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281, at 24796 to 26164 13520 mRNA_5153: 13521 - HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474, at 26390 to 28027 13521 mRNA_5154: 13522 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281, at 28775 to 30256 13522 mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30718 to 32151 13523 mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32964 to 35897 13524 mRNA_5157: 13525 - K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216, at 36318 to 38711 13525 mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39677 to 40567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41390 to 42543 13527
Locus Name Description Strand Distance (nt) Phenotype
mRNA_5149 13517 Hypothetical Protein + insig.
mRNA_5150 13518 Hypothetical Protein + 282 cofit
mRNA_5151 13519 HMMPfam-SUR7/PalI family-PF06687 - 1564 cofit
mRNA_5152 13520 HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281 - 576 insig.
mRNA_5153 13521 HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474 - 226 cofit
mRNA_5154 13522 HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281 + 748 insig.
mRNA_5155 13523 BLAST unknown [Tremella fuciformis] - 462 cofit
mRNA_5156 13524 K00108 betA, CHDH choline dehydrogenase + 813 insig.
mRNA_5157 13525 K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216 - 421 cofit
mRNA_5158 13526 K15128 MED6 mediator of RNA polymerase II transcription subunit 6 - 966 no data
mRNA_5159 13527 Hypothetical Protein + 823 cofit