Gene info for mRNA_4939 in Rhodosporidium toruloides IFO0880

mRNA_4939 13307: HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928

Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 1,365,348 to 1,366,647

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_4934: 13302 - K00611 OTC, argF, argI ornithine carbamoyltransferase, at 1354445 to 1355871 13302 mRNA_4935: 13303 - BLAST salivary gland secretion 1 [Moniliophthora roreri..., at 1356416 to 1359547 13303 mRNA_4936: 13304 - HMMPfam-MFS_1 like family-PF12832, at 1359714 to 1362398 13304 mRNA_4937: 13305 - HMMPfam-Single-strand binding protein family-PF00436,ProSiteProfiles-Single-strand binding (SSB) domain profile.-PS50935,SUPERFAMILY--SSF50249, at 1362763 to 1363546 13305 mRNA_4938: 13306 - HMMPfam-Protein of unknown function (DUF1749)-PF08538,SUPERFAMILY--SSF53474, at 1364242 to 1365196 13306 mRNA_4939: 13307 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1365348 to 1366647 13307 mRNA_4940: 13308 - K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9, at 1367349 to 1367987 13308 mRNA_4941: 13309 - K12608 CAF16 CCR4-NOT complex subunit CAF16, at 1368414 to 1369977 13309 mRNA_4942: 13310 - Hypothetical Protein, at 1370208 to 1371359 13310 mRNA_4943: 13311 - K13095 SF1 splicing factor 1, at 1372018 to 1374079 13311 mRNA_4944: 13312 - KOG1375 Beta tubulin, at 1374400 to 1376265 13312
Locus Name Description Strand Distance (nt) Phenotype
mRNA_4934 13302 K00611 OTC, argF, argI ornithine carbamoyltransferase + strong
mRNA_4935 13303 BLAST salivary gland secretion 1 [Moniliophthora roreri... + 545 cofit
mRNA_4936 13304 HMMPfam-MFS_1 like family-PF12832 - 167 insig.
mRNA_4937 13305 HMMPfam-Single-strand binding protein family-PF00436,ProSiteProfiles-Single-strand binding (SSB) domain profile.-PS50935,SUPERFAMILY--SSF50249 - 365 no data
mRNA_4938 13306 HMMPfam-Protein of unknown function (DUF1749)-PF08538,SUPERFAMILY--SSF53474 - 696 cofit
mRNA_4939 13307 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 - 152 cofit
mRNA_4940 13308 K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9 - 702 cofit
mRNA_4941 13309 K12608 CAF16 CCR4-NOT complex subunit CAF16 + 427 cofit
mRNA_4942 13310 Hypothetical Protein - 231 cofit
mRNA_4943 13311 K13095 SF1 splicing factor 1 - 659 no data
mRNA_4944 13312 KOG1375 Beta tubulin - 321 cofit